STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022604Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b. (411 aa)    
Predicted Functional Partners:
plcd3
Phosphoinositide phospholipase C.
   
 0.883
ENSACLP00000003629
Phosphoinositide phospholipase C.
   
 0.883
LOC113009934
Phosphoinositide phospholipase C.
   
 0.883
LOC113029046
Phosphoinositide phospholipase C.
   
 0.883
ENSACLP00000014484
Phosphoinositide phospholipase C.
    
 0.881
plce1
Phospholipase C, epsilon 1.
    
 0.881
ENSACLP00000003287
Synaptojanin 1.
    
 0.880
ENSACLP00000034439
Phosphoinositide kinase, FYVE finger containing.
     
0.875
plcd4
Phosphoinositide phospholipase C.
   
 0.867
ENSACLP00000014088
Phosphoinositide phospholipase C.
   
 0.867
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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