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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014960Translocase of outer mitochondrial membrane 40 homolog, like. (341 aa)    
Predicted Functional Partners:
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.956
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.951
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.937
tomm6
Translocase of outer mitochondrial membrane 6 homolog (yeast).
    
 0.909
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
   
 0.908
LOC113024812
Translocase of outer mitochondrial membrane 20b.
   
 0.895
ENSACLP00000034826
Translocase of outer mitochondrial membrane 20.
   
 0.895
ENSACLP00000039005
Uncharacterized protein.
   
 0.895
timm50
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.887
samm50
Sorting and assembly machinery component 50 homolog, like.
    
 0.864
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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