STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp8a1Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1164 aa)    
Predicted Functional Partners:
LOC113037120
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.977
LOC113012470
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.977
LOC113008528
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.977
LOC113012734
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.964
ENSACLP00000029815
Caspase 3; Belongs to the peptidase C14A family.
     
  0.857
ENSACLP00000030061
Caspase 3; Belongs to the peptidase C14A family.
     
  0.857
LOC113024393
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
     
  0.857
ENSACLP00000001476
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.846
atp11c
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.846
atp11b
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.846
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.