Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014969Apolipoprotein A-IV a. (250 aa)    
Predicted Functional Partners:
ENSACLP00000041064
Apolipoprotein Eb.
  
 
 
0.921
LOC113032020
Uncharacterized protein.
  
 
0.919
LOC113032148
Uncharacterized protein.
  
 
0.918
LOC113036452
Zgc:162608.
     
  0.914
ENSACLP00000016344
Uncharacterized protein.
  
  
0.905
LOC113014966
Apolipoprotein Ea.
  
 
 
0.886
LOC113014972
Apolipoprotein A-IV a.
  
 
 
0.852
LOC113019553
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.628
LOC113014215
Uncharacterized protein.
      
 0.614
LOC113015239
Uncharacterized protein.
      
 0.611
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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