STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014972Apolipoprotein A-IV a. (214 aa)    
Predicted Functional Partners:
ENSACLP00000030440
Phospholipase A2, group XV.
   
 0.866
ENSACLP00000030483
Lecithin-cholesterol acyltransferase.
   
 0.866
ENSACLP00000014769
DUF1943 domain-containing protein.
   
 0.856
LOC113011617
Apolipoprotein Ba.
   
 0.856
LOC113037288
Apolipoprotein Bb, tandem duplicate 2.
   
 0.856
ENSACLP00000033115
Vitellogenin domain-containing protein.
   
 0.856
ENSACLP00000033130
Uncharacterized protein.
   
 0.856
LOC113006719
Vitellogenin 3, phosvitinless.
   
 0.814
LOC113007135
Uncharacterized protein.
   
 0.814
LOC113007136
Uncharacterized protein.
   
 0.814
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.