STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004973Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
ENSACLP00000002721
Sulfatase modifying factor 1.
    
  0.548
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.536
ENSACLP00000026242
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
     
 0.517
pld1
Phospholipase.
   
 
 0.502
ENSACLP00000021721
Phospholipase.
   
 
 0.502
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 0.498
dgat2
Diacylglycerol O-acyltransferase 2.
   
 
 0.493
ENSACLP00000019527
Phospholipase.
   
 
 0.492
PPTC7
Protein phosphatase; Belongs to the PP2C family.
   
   0.479
LOC113025795
Protein phosphatase; Belongs to the PP2C family.
   
   0.479
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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