STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfyve19Zinc finger, FYVE domain containing 19. (458 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
    
 0.986
ENSACLP00000012873
SH3 domain-containing protein.
    
 0.986
ENSACLP00000014175
Intersectin 2b.
    
 0.986
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.924
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.924
RPS27A
Ribosomal protein S27a.
    
  0.917
ENSACLP00000003123
UEV and lactate/malate dehyrogenase domains.
    
 0.891
LOC113027041
Zgc:123278.
    
 0.873
tsg101
Tumor susceptibility 101a.
    
 0.873
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.848
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.