STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020429Myosin, light chain kinase 5. (871 aa)    
Predicted Functional Partners:
LOC113019349
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.897
LOC113020329
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.897
CALML6
Calmodulin like 6.
    
 0.889
MYL12B
Myosin light chain 12B.
   
 0.887
ENSACLP00000014549
Myosin, light chain 9b, regulatory.
   
 0.887
LOC113010433
Uncharacterized protein.
   
 0.887
ENSACLP00000020804
Calmodulin-like 4a.
    
  0.885
ENSACLP00000034132
Calmodulin-like 4b.
    
  0.884
ENSACLP00000014047
Uncharacterized protein.
   
 0.883
LOC113011086
Myosin, light chain 13.
   
 0.883
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.