Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000004988Ig-like domain-containing protein. (292 aa)    
Predicted Functional Partners:
ENSACLP00000014291
Rapunzel 6.
  
     0.465
LOC113016188
Uncharacterized protein.
  
     0.458
ENSACLP00000026508
Uncharacterized protein.
  
     0.453
LOC113032049
Rapunzel 4.
  
     0.449
ENSACLP00000018325
S_100 domain-containing protein; Belongs to the S-100 family.
  
     0.434
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
 0.418
LOC113015356
Rapunzel 2.
  
     0.418
ntng1
Netrin g1a.
    
 0.418
LOC113032047
Rapunzel 5.
  
     0.417
ENSACLP00000017047
Ig-like domain-containing protein.
  
 
  0.416
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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