STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAP2ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. (1216 aa)    
Predicted Functional Partners:
grm1
Glutamate receptor, metabotropic 1a.
    
  0.862
LOC113013301
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
  
  
 
0.851
LOC113011728
Glutamate receptor, metabotropic 1b.
    
  0.834
LOC113030687
Glutamate receptor, metabotropic 5a.
    
  0.827
grm5
Glutamate receptor, metabotropic 5b.
    
  0.827
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
     
0.805
unc5b
Unc-5 netrin receptor B.
    
  0.672
CDKN2A
Cyclin dependent kinase inhibitor 2A.
    
  0.616
ENSACLP00000017769
Rap guanine nucleotide exchange factor (GEF) 2.
   
  0.609
ENSACLP00000017872
ANK_REP_REGION domain-containing protein.
    
   0.595
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.