STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005001Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
ppid
Peptidylprolyl isomerase D.
    
 0.913
aifm1
Apoptosis inducing factor mitochondrion associated 1.
    
 0.889
vdac1
Voltage-dependent anion channel 1.
   
 0.889
SLC25A5
Solute carrier family 25 member 5; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.849
LOC113007598
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.849
slc25a4
Solute carrier family 25 member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.849
prpf19
Pre-mRNA processing factor 19.
    
 0.836
xab2
XPA binding protein 2.
    
 0.833
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.832
snw1
SNW domain containing 1.
    
 0.832
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.