STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005008Rho guanine nucleotide exchange factor (GEF) 10-like b. (1034 aa)    
Predicted Functional Partners:
sting1
Transmembrane protein 173.
   
 0.834
ENSACLP00000010589
Tumor protein p53 binding protein, 1.
    
 0.779
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.461
ENSACLP00000035383
Uncharacterized protein.
    
 0.461
gna12
G protein subunit alpha 12.
    
  0.452
LOC113021491
Guanine nucleotide binding protein (G protein), alpha 13b.
    
  0.452
ENSACLP00000015907
Guanine nucleotide binding protein (G protein), alpha 13b.
    
  0.452
LOC113028194
Uncharacterized protein.
    
  0.452
ENSACLP00000014871
Rho guanine nucleotide exchange factor 28.
    
 0.445
ENSACLP00000022071
Uncharacterized protein.
    
 0.445
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.