STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008712Cytochrome c oxidase assembly factor 6. (81 aa)    
Predicted Functional Partners:
ENSACLP00000008064
Uncharacterized protein.
   
 0.986
ENSACLP00000024230
Ubiquinol-cytochrome c reductase binding protein.
   
 0.984
LOC113035578
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.981
LOC113025757
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.979
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.967
ENSACLP00000028346
Cytochrome c oxidase subunit 5Ab.
   
 0.967
ENSACLP00000000474
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.963
ENSACLP00000036070
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.963
LOC113021865
Cytochrome c oxidase subunit 6C.
   
 0.962
LOC113023584
Cytochrome c oxidase subunit 4I1.
   
 0.955
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.