Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prdm4PR domain containing 4. (878 aa)    
Predicted Functional Partners:
LOC113019366
Nerve growth factor receptor b.
     
  0.872
ENSACLP00000037698
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
  0.872
LOC113015524
Uncharacterized protein.
   
 0.848
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.846
ENSACLP00000008367
SET domain containing 7, histone lysine methyltransferase.
   
 0.823
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
   
 0.818
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.808
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.804
camkmt
Calmodulin-lysine N-methyltransferase.
     
  0.792
smyd4
SET and MYND domain containing 4.
   
 0.785
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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