STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005047Immunoglobin superfamily, member 21b. (428 aa)    
Predicted Functional Partners:
ENSACLP00000005288
Vacuolar protein sorting 13 homolog D.
      
 0.710
lrmda
Leucine rich melanocyte differentiation associated.
    
 
 0.622
ENSACLP00000029644
Low density lipoprotein receptor adaptor protein 1b.
     
 0.611
LOC113011005
Palmdelphin a.
      
 0.606
park7
Parkinson protein 7.
   
 0.578
LOC113022999
Cyclin dependent kinase 18; Belongs to the protein kinase superfamily.
    
 0.577
LOC113022358
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
   
 
 0.568
lrrc3b
Leucine rich repeat containing 3B.
    
 
 0.567
clvs2
Clavesin 2.
   
 
 0.563
CLVS1
Clavesin 1.
   
 
 0.563
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.