Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033014Ring finger protein 215. (470 aa)    
Predicted Functional Partners:
rspo2
R-spondin 2.
    
 0.862
ENSACLP00000000381
R-spondin 1.
    
 0.766
itfg2
Integrin alpha FG-GAP repeat containing 2.
      
 0.762
ENSACLP00000029012
R-spondin 3.
    
 0.757
ENSACLP00000009291
Uncharacterized protein.
    
 0.749
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.743
ENSACLP00000035637
UBX domain-containing protein 7.
    
   0.731
ubox5
U-box domain containing 5.
    
 0.717
LOC113006763
Lipoxygenase domain-containing protein.
    
 
 0.708
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
  0.682
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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