Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
p4ha3Prolyl 4-hydroxylase, alpha polypeptide III. (537 aa)    
Predicted Functional Partners:
pycr3
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
 0.915
MYADML2
Myeloid associated differentiation marker like 2.
     
 0.903
ENSACLP00000019148
Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.
     
 0.879
prodh2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.878
LOC113025744
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.878
LOC113034089
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.878
LOC113027932
Prolyl 4-hydroxylase, alpha polypeptide I a.
     
 0.875
p4ha1
Prolyl 4-hydroxylase, alpha polypeptide I b.
     
 0.875
lap3
Leucine aminopeptidase 3.
     
 0.874
ENSACLP00000000177
Protein disulfide-isomerase.
    
 0.872
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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