Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113024487SH2 domain containing 3A. (842 aa)    
Predicted Functional Partners:
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.678
bcar1
BCAR1 scaffold protein, Cas family member.
    
 0.678
cass4
Cas scaffold protein family member 4.
    
 0.660
efs
Embryonal Fyn-associated substrate.
    
 0.642
ENSACLP00000001136
Von Willebrand factor A domain containing 5B2.
    
 
 0.636
slc35e1
Solute carrier family 35 member E1.
    
 
 0.629
kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
     
 0.626
plbd2
Phospholipase B-like; Putative phospholipase.
      
 0.609
cramp1
Cramped chromatin regulator homolog 1.
    
 0.572
sugct
Succinyl-CoA:glutarate-CoA transferase.
      
 0.563
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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