Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005077Homeobox B13a. (306 aa)    
Predicted Functional Partners:
meis2
Meis homeobox 2a.
    
 
 0.597
LOC113006792
Meis homeobox 2b.
    
 
 0.597
LOC113034827
Meis homeobox 1 b.
    
 
 0.597
ENSACLP00000040696
Zic family member 1 (odd-paired homolog, Drosophila).
    
 
 0.524
LOC113031262
Androgen receptor.
    
 
 0.464
LOC113034111
Uncharacterized protein.
    
 
 0.443
LOC113026032
Sperm associated antigen 8.
      
 0.419
chn2
Chimerin 2.
      
 0.413
LOC113021324
Homeobox B7a.
    
 
 0.405
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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