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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2cd3C2 domain containing 3 centriole elongation regulator. (2208 aa)    
Predicted Functional Partners:
ENSACLP00000013472
Centrosomal protein 76.
     
 0.701
cep41
Centrosomal protein 41.
     
 0.638
ENSACLP00000009671
OFD1 centriole and centriolar satellite protein.
    
 0.629
sclt1
Sodium channel and clathrin linker 1.
    
 0.597
ENSACLP00000013937
Centromere protein F.
      
 0.576
ENSACLP00000026146
Intraflagellar transport 88 homolog.
    
 
 0.552
ENSACLP00000030893
Centrosomal protein 290.
    
 0.552
cep83
Centrosomal protein 83.
     
 0.549
gramd4
GRAM domain containing 4a.
     
 0.539
LOC113026215
GRAM domain containing 4b.
     
 0.539
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.