Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005089Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
   0.933
arhgap23
Rho GTPase activating protein 23a.
    
 
 0.884
LOC113027774
Uncharacterized protein.
    
 
 0.884
LOC113021483
Uncharacterized protein.
    
   0.724
LOC113023765
Junction plakoglobin a.
    
   0.724
LOC113014539
Uncharacterized protein.
    
   0.724
arhgap21
Rho GTPase activating protein 21a.
    
 
 0.723
ENSACLP00000033750
Rho GTPase activating protein 21b.
    
 
 0.723
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
      
 0.655
LOC113034476
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
      
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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