Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005103Oxysterol-binding protein; Belongs to the OSBP family. (755 aa)    
Predicted Functional Partners:
ENSACLP00000031727
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.811
gak
Cyclin G associated kinase.
   
 
 0.754
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.731
mospd2
Motile sperm domain containing 2.
    
 
 0.692
LOC113013172
MSP domain-containing protein.
    
 
 0.662
ENSACLP00000002940
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.595
LOC113017771
MSP domain-containing protein.
    
 
 0.565
mospd1
Motile sperm domain containing 1.
    
 
 0.565
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.544
ENSACLP00000026081
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.516
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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