Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021324Homeobox B7a. (271 aa)    
Predicted Functional Partners:
LOC113021320
Homeobox domain-containing protein.
   
 
 0.978
LOC113028070
Homeobox B6b.
   
 
 0.978
LOC113021319
Homeobox domain-containing protein.
   
 
 0.927
ENSACLP00000035265
Homeobox B5b.
   
 
 0.927
LOC113033212
Nuclear receptor subfamily 5, group A, member 1a.
    
 0.912
nr5a2
Nuclear receptor subfamily 5, group A, member 2.
    
 0.912
hoxc5
Homeobox C5a.
   
   0.911
LOC113007968
Homeobox D4a.
   
 
 0.895
hoxc6
Homeobox C6a.
   
 
 0.882
HOXA7
Homeobox A7.
   
   0.881
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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