Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021320Homeobox domain-containing protein. (284 aa)    
Predicted Functional Partners:
LOC113021324
Homeobox B7a.
   
 
 0.978
HOXA7
Homeobox A7.
   
   0.918
LOC113021319
Homeobox domain-containing protein.
   
 
 0.914
ENSACLP00000035265
Homeobox B5b.
   
 
 0.914
hoxc5
Homeobox C5a.
   
 
 0.853
hoxc4
Homeobox C4a.
   
 
 0.844
LOC113031962
Pre-B-cell leukemia homeobox 2.
    
 0.834
pbx3
Homeobox domain-containing protein.
    
 0.834
LOC113020585
Pre-B-cell leukemia transcription factor 4.
    
 0.834
LOC113009904
Pre-B-cell leukemia homeobox 1a.
    
 0.834
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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