Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL21A1Collagen type XXI alpha 1 chain. (954 aa)    
Predicted Functional Partners:
ENSACLP00000026996
VWFA domain-containing protein.
   
 0.647
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.636
lrrc75b
Leucine rich repeat containing 75Ba.
      
 0.559
dusp22
Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.557
ENSACLP00000032632
Glucagon receptor b; Belongs to the G-protein coupled receptor 2 family.
    
 0.550
LOC113021706
Si:ch211-157b11.8.
      
 0.549
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
    
 
 0.537
ENSACLP00000017730
DnaJ (Hsp40) homolog, subfamily C, member 2.
     
 0.530
ENSACLP00000031964
Integrin beta; Belongs to the integrin beta chain family.
    
 0.530
ENSACLP00000033830
Integrin beta.
    
 0.530
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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