STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005122C-type lectin domain-containing protein. (221 aa)    
Predicted Functional Partners:
prdm2
PR domain containing 2, with ZNF domain b.
    
 0.756
LOC113013502
PR domain containing 2, with ZNF domain a.
    
 0.756
LOC113014197
Uncharacterized protein.
    
  0.721
ENSACLP00000016464
Tyrosine-protein kinase.
   
 0.620
syk
Tyrosine-protein kinase.
   
 0.620
tyrobp
Uncharacterized protein.
   
 0.587
YES1
Tyrosine-protein kinase.
   
 
  0.471
LOC113013337
Tyrosine-protein kinase.
   
 
  0.471
blk
Tyrosine-protein kinase.
   
 
  0.471
LOC113009995
Tyrosine-protein kinase.
   
 
  0.471
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]