Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005123BHLH domain-containing protein. (138 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
     
  0.795
fancg
FA complementation group G.
    
  0.588
fancf
FA complementation group F.
    
  0.588
ENSACLP00000020445
FA complementation group L.
    
  0.588
ENSACLP00000022421
FA complementation group C.
    
  0.588
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.532
ENSACLP00000017664
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.532
ENSACLP00000022686
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.515
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.503
ENSACLP00000003442
FA complementation group E.
    
  0.503
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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