STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021319Homeobox domain-containing protein. (309 aa)    
Predicted Functional Partners:
LOC113021320
Homeobox domain-containing protein.
   
 
0.919
LOC113028070
Homeobox B6b.
   
 
0.919
LOC113021324
Homeobox B7a.
   
 
0.913
LOC113021323
Homeobox B4a.
  
 
0.902
hoxc4
Homeobox C4a.
   
 
0.878
HOXA7
Homeobox A7.
   
  
0.812
LOC113021318
Homeobox B3a.
   
  
0.805
LOC113007968
Homeobox D4a.
   
 
0.800
LOC113031962
Pre-B-cell leukemia homeobox 2.
    
 0.788
pbx3
Homeobox domain-containing protein.
    
 0.788
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.