Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
meiocUncharacterized protein. (775 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 
 0.746
sycp3
Synaptonemal complex protein 3.
      
 0.713
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.688
ENSACLP00000023961
Uncharacterized protein.
      
 0.658
meiob
Methionine sulfoxide reductase B1b.
      
 0.655
fam171a1
Family with sequence similarity 171 member A1.
      
 0.647
fam171a2
Family with sequence similarity 171 member A2b.
      
 0.647
mysm1
Myb-like, SWIRM and MPN domains 1.
      
 0.635
LOC113029849
REC8 meiotic recombination protein b.
      
 0.610
rbm46
RNA binding motif protein 46.
      
 0.608
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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