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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpy30Dpy-30 histone methyltransferase complex regulatory subunit. (127 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.998
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.998
wdr5
WD repeat domain 5.
   
 0.976
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
    
 0.950
setd1a
SET domain containing 1A, histone lysine methyltransferase.
    
 0.950
ENSACLP00000019970
CXXC finger protein 1a.
    
 0.947
ENSACLP00000031488
CXXC finger protein 1b.
    
 0.947
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
   0.940
RPS27A
Ribosomal protein S27a.
    
   0.934
ENSACLP00000018302
Uncharacterized protein.
    
 0.924
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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