ENSACLP00000005167 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSACLP00000005167

Uncharacterized protein. (600 aa)

Predicted Functional Partners:

unc5a

0.971

unc5b

0.919

LOC113025731

0.909

ENSACLP00000029134

0.909

LOC113033469

0.893

ENSACLP00000039929

0.893

ENSACLP00000015298

0.849

LOC113028111

0.849

ENSACLP00000006413

0.813

ENSACLP00000019899

0.813

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005167	ENSACLP00000006413	ENSACLP00000005167	ENSACLP00000006413	Uncharacterized protein.	DCC netrin 1 receptor.	0.813
ENSACLP00000005167	ENSACLP00000015298	ENSACLP00000005167	ENSACLP00000015298	Uncharacterized protein.	NBR1 autophagy cargo receptor b.	0.849
ENSACLP00000005167	ENSACLP00000019899	ENSACLP00000005167	ENSACLP00000019899	Uncharacterized protein.	Neogenin 1b.	0.813
ENSACLP00000005167	ENSACLP00000029134	ENSACLP00000005167	ENSACLP00000029134	Uncharacterized protein.	Unc-5 netrin receptor C.	0.909
ENSACLP00000005167	ENSACLP00000039929	ENSACLP00000005167	ENSACLP00000039929	Uncharacterized protein.	Unc-5 netrin receptor Da.	0.893
ENSACLP00000005167	LOC113025731	ENSACLP00000005167	ENSACLP00000021857	Uncharacterized protein.	Unc-5 netrin receptor C.	0.909
ENSACLP00000005167	LOC113028111	ENSACLP00000005167	ENSACLP00000036933	Uncharacterized protein.	NBR1 autophagy cargo receptor a.	0.849
ENSACLP00000005167	LOC113033469	ENSACLP00000005167	ENSACLP00000006699	Uncharacterized protein.	Unc-5 netrin receptor Db.	0.893
ENSACLP00000005167	unc5a	ENSACLP00000005167	ENSACLP00000005507	Uncharacterized protein.	Unc-5 netrin receptor A.	0.971
ENSACLP00000005167	unc5b	ENSACLP00000005167	ENSACLP00000038299	Uncharacterized protein.	Unc-5 netrin receptor B.	0.919
ENSACLP00000006413	ENSACLP00000005167	ENSACLP00000006413	ENSACLP00000005167	DCC netrin 1 receptor.	Uncharacterized protein.	0.813
ENSACLP00000006413	ENSACLP00000029134	ENSACLP00000006413	ENSACLP00000029134	DCC netrin 1 receptor.	Unc-5 netrin receptor C.	0.959
ENSACLP00000006413	ENSACLP00000039929	ENSACLP00000006413	ENSACLP00000039929	DCC netrin 1 receptor.	Unc-5 netrin receptor Da.	0.951
ENSACLP00000006413	LOC113025731	ENSACLP00000006413	ENSACLP00000021857	DCC netrin 1 receptor.	Unc-5 netrin receptor C.	0.959
ENSACLP00000006413	LOC113033469	ENSACLP00000006413	ENSACLP00000006699	DCC netrin 1 receptor.	Unc-5 netrin receptor Db.	0.951
ENSACLP00000006413	unc5a	ENSACLP00000006413	ENSACLP00000005507	DCC netrin 1 receptor.	Unc-5 netrin receptor A.	0.980
ENSACLP00000006413	unc5b	ENSACLP00000006413	ENSACLP00000038299	DCC netrin 1 receptor.	Unc-5 netrin receptor B.	0.980
ENSACLP00000015298	ENSACLP00000005167	ENSACLP00000015298	ENSACLP00000005167	NBR1 autophagy cargo receptor b.	Uncharacterized protein.	0.849
ENSACLP00000015298	LOC113028111	ENSACLP00000015298	ENSACLP00000036933	NBR1 autophagy cargo receptor b.	NBR1 autophagy cargo receptor a.	0.982
ENSACLP00000019899	ENSACLP00000005167	ENSACLP00000019899	ENSACLP00000005167	Neogenin 1b.	Uncharacterized protein.	0.813