Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000005176Ankyrin repeat and KH domain containing 1. (2292 aa)    
Predicted Functional Partners:
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
   0.873
recql4
RecQ helicase-like 4.
    
   0.782
ENSACLP00000010243
Component of oligomeric golgi complex 3.
   
    0.730
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
    0.730
LOC113011647
BHLH domain-containing protein.
   
    0.727
ENSACLP00000039435
Uncharacterized protein.
   
    0.727
ENSACLP00000020708
Nipped-B protein.
   
    0.705
ENSACLP00000028272
Nipped-B protein.
   
    0.705
pds5b
PDS5 cohesin associated factor B.
   
    0.686
pds5a
PDS5 cohesin associated factor A.
   
    0.686
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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