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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mns1Meiosis-specific nuclear structural 1. (497 aa)    
Predicted Functional Partners:
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
 
 0.884
tekt2
Tektin 2 (testicular).
    
 
 0.882
efhb
EF-hand domain family, member B.
    
 
 0.876
c20h1orf194
Uncharacterized protein.
    
 
 0.864
tekt3
Tektin 3.
   
 
 0.864
ENSACLP00000016059
Coiled-coil domain containing 173.
   
  0.863
cfap52
Cilia and flagella associated protein 52.
    
  0.861
ENSACLP00000008758
Cilia and flagella associated protein 126.
    
   0.856
cfap20
Cilia and flagella associated protein 20.
    
   0.856
efhc1
EF-hand domain (C-terminal) containing 1.
    
   0.856
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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