Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mns1Meiosis-specific nuclear structural 1. (497 aa)    
Predicted Functional Partners:
LOC113026032
Sperm associated antigen 8.
   
   0.969
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.961
cfap161
Cilia and flagella associated protein 161.
   
 0.958
efhb
EF-hand domain family, member B.
   
 
 0.955
tekt2
Tektin 2 (testicular).
   
 
 0.954
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
 0.944
cfap20
Cilia and flagella associated protein 20.
    
 
 0.943
ccdc105
Coiled-coil domain containing 105.
   
   0.934
cfap52
Cilia and flagella associated protein 52.
   
  0.928
ENSACLP00000016059
Coiled-coil domain containing 173.
   
  0.924
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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