Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fuca1Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (474 aa)    
Predicted Functional Partners:
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
   
  0.893
gla
Alpha-galactosidase.
  
 
 0.819
ENSACLP00000012591
Alpha-galactosidase.
  
 
 0.815
ENSACLP00000012612
Alpha-galactosidase.
  
 
 0.815
ENSACLP00000012835
Ubiquitin carboxyl-terminal hydrolase.
    
   0.744
LOC113036963
Ubiquitin carboxyl-terminal hydrolase.
    
   0.744
LOC113030892
Ubiquitin carboxyl-terminal hydrolase.
    
   0.744
naglu
N-acetylglucosaminidase, alpha.
   
  
 0.678
LOC113018643
Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
     
 0.656
ltv1
LTV1 ribosome biogenesis factor.
      
 0.651
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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