Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
suoxSulfite oxidase. (562 aa)    
Predicted Functional Partners:
mpst
Sulfurtransferase.
  
 
 0.988
LOC113021094
Sulfurtransferase.
  
 
 0.988
LOC113031539
ETHE1 persulfide dioxygenase.
  
 
 0.987
LOC113008774
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
 
 
 0.978
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.975
LOC113031405
Cytochrome b5 reductase 4.
  
 
 0.965
LOC113029529
Rhodanese domain-containing protein.
    
 0.962
LOC113029548
Rhodanese domain-containing protein.
    
 0.962
LOC113031469
Si:dkey-165n16.1.
    
 0.962
LOC113029316
Si:ch211-161h7.8.
    
 0.962
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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