STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022113Tribbles pseudokinase 3. (353 aa)    
Predicted Functional Partners:
atf4
Activating transcription factor 4a.
   
 0.989
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.978
stk40
Serine/threonine kinase 40.
    
 
 0.976
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.960
LOC113030100
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.960
ENSACLP00000023703
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.960
LOC113034924
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.960
akt2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.960
sqstm1
Sequestosome 1.
    
 
 0.914
LOC113012150
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
 
 0.900
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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