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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2OUbiquitin conjugating enzyme E2 O. (1388 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 0.947
fancm
Uncharacterized protein.
    
 0.889
ENSACLP00000024683
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.885
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.873
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.871
LOC113007418
RAN binding protein 2.
   
 0.866
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
  
 0.865
LOC113022283
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
  
 0.865
uba6
Ubiquitin like modifier activating enzyme 6.
  
 0.865
ENSACLP00000038282
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
   
 0.857
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.