STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005236Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
CDYL2
Chromodomain Y like 2.
    
 0.647
cdyl
Chromodomain protein, Y-like.
    
 0.647
ENSACLP00000014482
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.531
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.531
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.489
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 0.470
LOC113030109
Lysine (K)-specific demethylase 6B, b.
    
 0.450
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.450
ENSACLP00000028690
Lysine (K)-specific demethylase 6B, a.
    
 0.450
LOC113015778
Lysine (K)-specific demethylase 6A, like.
    
 0.450
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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