STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113026558Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (477 aa)    
Predicted Functional Partners:
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.972
ENSACLP00000020299
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.968
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.965
ENSACLP00000016157
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.961
ENSACLP00000006383
Si:dkey-159f12.2.
  
 
 0.958
ENSACLP00000011733
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.957
LOC113032919
Ribosomal protein L35.
  
 
 0.954
RPL35
60S ribosomal protein L35.
  
 
 0.954
RPL5
Ribosomal protein L5.
  
 
 0.952
RPL5-2
Ribosomal protein L5b.
  
 
 0.952
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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