Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113011876Uncharacterized protein. (641 aa)    
Predicted Functional Partners:
chtop
Chromatin target of PRMT1a.
    
 
 0.835
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.646
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.613
thoc7
THO complex 7.
    
   0.481
dctn5
Dynactin 5.
    
 0.474
znf276
Zinc finger protein 276.
    
 
 0.468
wdr18
WD repeat domain 18.
   
 0.468
ENSACLP00000011297
Uncharacterized protein.
  
 
   0.463
ENSACLP00000011126
Testis expressed 10.
    
 0.457
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.444
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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