Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000005262Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
itfg2
Integrin alpha FG-GAP repeat containing 2.
     
 0.912
kptn
Kaptin (actin binding protein).
     
 0.871
c17h12orf66
Si:ch211-125a15.1.
     
 0.815
immp1l
Mitochondrial inner membrane protease subunit.
     
 0.730
rhbdl2
Rhomboid-related protein 2; Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
      
 0.720
dgke
Diacylglycerol kinase.
      
 0.676
ENSACLP00000006097
Uncharacterized protein.
   
    0.663
ENSACLP00000006123
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
    0.663
slc7a6os
Solute carrier family 7 member 6 opposite strand.
      
 0.663
ENSACLP00000015513
Si:dkey-31g6.6.
      
 0.662
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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