STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stambpSTAM binding protein b. (432 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.950
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.947
gak
Cyclin G associated kinase.
    
  0.911
RPS27A
Ribosomal protein S27a.
   
 0.910
chmp2a
Charged multivesicular body protein 2A.
    
 
 0.847
chmp3
Charged multivesicular body protein 3.
    
 
 0.843
grb2
Growth factor receptor-bound protein 2b.
    
  0.839
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.834
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.825
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.817
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.