STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014801Hes related family bHLH transcription factor with YRPW motif like. (361 aa)    
Predicted Functional Partners:
LOC113032567
Uncharacterized protein.
  
  
 
0.843
hey1
Hes-related family bHLH transcription factor with YRPW motif 1.
  
  
 
0.835
fancg
FA complementation group G.
    
  0.646
fancf
FA complementation group F.
    
  0.646
ENSACLP00000020445
FA complementation group L.
    
  0.646
ENSACLP00000022421
FA complementation group C.
    
  0.646
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.623
ENSACLP00000003442
FA complementation group E.
    
  0.623
ENSACLP00000002102
Mitochondrial ribosomal protein L1.
    
  0.603
ENSACLP00000009703
Fanconi_A_N domain-containing protein.
    
  0.585
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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