STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014801Hes related family bHLH transcription factor with YRPW motif like. (361 aa)    
Predicted Functional Partners:
LOC113032567
Uncharacterized protein.
     
  0.872
hey2
Hes-related family bHLH transcription factor with YRPW motif 2.
     
  0.872
hey1
Hes-related family bHLH transcription factor with YRPW motif 1.
     
  0.872
fancm
Uncharacterized protein.
     
  0.795
ENSACLP00000031548
Notch receptor 1b.
    
 0.783
LOC113025559
Notch receptor 1a.
    
 0.783
pggt1b
Protein geranylgeranyltransferase type I, beta subunit.
    
 
 0.770
ist1
IST1 factor associated with ESCRT-III.
    
   0.726
LOC113016878
Notch receptor 2.
    
 0.668
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.663
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.