STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setbp1SET binding protein 1. (1526 aa)    
Predicted Functional Partners:
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.911
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.898
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.841
MSL3
MSL complex subunit 3.
  
 
 0.767
kmt5b
Lysine methyltransferase 5B.
   
 
 0.747
LOC113020311
SET domain-containing protein.
   
 
 0.747
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.730
ENSACLP00000008692
AT rich interactive domain 4A (RBP1-like).
   
 
 0.720
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
   
 
 0.720
rbbp5
Retinoblastoma binding protein 5.
    
 0.707
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.