Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ddx10RNA helicase. (851 aa)    
Predicted Functional Partners:
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
 
 0.995
UTP14C
UTP14C small subunit processome component.
   
 0.993
nol10
Nucleolar protein 10.
   
 
 0.992
aatf
Apoptosis antagonizing transcription factor.
   
 
 0.992
bysl
Bystin-like.
   
 
 0.990
ENSACLP00000000465
RNA helicase.
   
 
 0.986
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.986
wdr43
WD repeat domain 43.
   
 0.984
LOC113016769
PWP2 small subunit processome component.
   
 0.982
nom1
Nucleolar protein with MIF4G domain 1.
   
 
 0.981
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.