STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stard13StAR-related lipid transfer (START) domain containing 13a. (1407 aa)    
Predicted Functional Partners:
ENSACLP00000008120
RAS p21 protein activator (GTPase activating protein) 1a.
    
 
 0.681
LOC113022989
Cell division cycle 42.
   
 0.645
LOC113022717
Tensin 2b.
    
 
 0.644
LOC113013633
Tensin 2a.
    
 
 0.644
ENSACLP00000004733
Tensin 1b.
    
 
 0.609
ENSACLP00000013344
Tensin 1.
    
 
 0.609
ENSACLP00000013420
Uncharacterized protein.
    
 
 0.609
TNS3
Tensin 3.
    
 
 0.609
TNS3-2
Tensin 3.
    
 
 0.609
LOC113012818
Uncharacterized protein.
   
 0.578
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.