STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kat14Lysine acetyltransferase 14. (792 aa)    
Predicted Functional Partners:
sgf29
SAGA complex associated factor 29.
   
 0.996
yeats2
YEATS domain containing 2.
   
 0.983
ENSACLP00000009419
Zinc finger, ZZ-type containing 3.
   
 0.982
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
   
 0.977
dr1
Down-regulator of transcription 1.
    
 0.966
mbip
MAP3K12 binding inhibitory protein 1.
    
 0.941
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.929
LOC113014255
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.929
wdr5
WD repeat domain 5.
    
 0.922
LOC113017711
Uncharacterized protein.
    
 0.911
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.