STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc30a9Solute carrier family 30 member 9. (576 aa)    
Predicted Functional Partners:
ENSACLP00000003123
UEV and lactate/malate dehyrogenase domains.
  
    0.810
LOC113027040
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.715
LOC113026538
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.715
mdh1
Malate dehydrogenase.
  
    0.715
fam114a1
Family with sequence similarity 114 member A1.
  
    0.715
ENSACLP00000028847
Malate dehydrogenase.
  
    0.715
LOC113006361
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.715
LOC113034741
Malate dehydrogenase 1Ab, NAD (soluble).
  
    0.715
mdh1b
Malate dehydrogenase 1B, NAD (soluble).
  
    0.715
slc30a4
Solute carrier family 30 member 4.
  
 
 0.658
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.