STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113006831BTB domain-containing protein. (805 aa)    
Predicted Functional Partners:
LOC113021093
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.774
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.774
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.769
tfap2e
Transcription factor AP-2 epsilon.
    
 0.768
tfap2a
Transcription factor AP-2 alpha.
    
 0.768
tfap2c
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
    
 0.768
tfap2b
Transcription factor AP-2 beta.
    
 0.768
kctd2
Potassium channel tetramerization domain containing 2.
    
 
 0.724
kctd5
Potassium channel tetramerization domain containing 5a.
    
 0.582
yipf6
Protein YIPF.
      
 0.549
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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