ENSACLP00000005326 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000005326

Carn_acyltransf domain-containing protein. (131 aa)

Predicted Functional Partners:

ENSACLP00000009054

0.837

LOC113030206

0.768

scp2

0.748

LOC113016539

0.748

hsdl2

0.745

ENSACLP00000024264

0.742

cpt2

0.727

acox1

0.702

LOC113010236

0.698

pex5l

0.698

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000005326	ENSACLP00000009054	ENSACLP00000005326	ENSACLP00000009054	Carn_acyltransf domain-containing protein.	Ribonuclease P/MRP 14 subunit.	0.837
ENSACLP00000005326	ENSACLP00000024264	ENSACLP00000005326	ENSACLP00000024264	Carn_acyltransf domain-containing protein.	Enoyl-CoA delta isomerase 2.	0.742
ENSACLP00000005326	LOC113010236	ENSACLP00000005326	ENSACLP00000026121	Carn_acyltransf domain-containing protein.	Peroxisomal biogenesis factor 5-like b.	0.698
ENSACLP00000005326	LOC113016539	ENSACLP00000005326	ENSACLP00000040038	Carn_acyltransf domain-containing protein.	Sterol carrier protein 2b.	0.748
ENSACLP00000005326	LOC113030206	ENSACLP00000005326	ENSACLP00000009612	Carn_acyltransf domain-containing protein.	Malate synthase-like.	0.768
ENSACLP00000005326	acox1	ENSACLP00000005326	ENSACLP00000004885	Carn_acyltransf domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.702
ENSACLP00000005326	cpt2	ENSACLP00000005326	ENSACLP00000040018	Carn_acyltransf domain-containing protein.	Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.	0.727
ENSACLP00000005326	hsdl2	ENSACLP00000005326	ENSACLP00000012921	Carn_acyltransf domain-containing protein.	Hydroxysteroid dehydrogenase like 2.	0.745
ENSACLP00000005326	pex5l	ENSACLP00000005326	ENSACLP00000029221	Carn_acyltransf domain-containing protein.	Peroxisomal biogenesis factor 5-like a.	0.698
ENSACLP00000005326	scp2	ENSACLP00000005326	ENSACLP00000018948	Carn_acyltransf domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.748
ENSACLP00000009054	ENSACLP00000005326	ENSACLP00000009054	ENSACLP00000005326	Ribonuclease P/MRP 14 subunit.	Carn_acyltransf domain-containing protein.	0.837
ENSACLP00000009054	ENSACLP00000024264	ENSACLP00000009054	ENSACLP00000024264	Ribonuclease P/MRP 14 subunit.	Enoyl-CoA delta isomerase 2.	0.940
ENSACLP00000009054	LOC113010236	ENSACLP00000009054	ENSACLP00000026121	Ribonuclease P/MRP 14 subunit.	Peroxisomal biogenesis factor 5-like b.	0.819
ENSACLP00000009054	LOC113016539	ENSACLP00000009054	ENSACLP00000040038	Ribonuclease P/MRP 14 subunit.	Sterol carrier protein 2b.	0.992
ENSACLP00000009054	LOC113030206	ENSACLP00000009054	ENSACLP00000009612	Ribonuclease P/MRP 14 subunit.	Malate synthase-like.	0.997
ENSACLP00000009054	acox1	ENSACLP00000009054	ENSACLP00000004885	Ribonuclease P/MRP 14 subunit.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.986
ENSACLP00000009054	cpt2	ENSACLP00000009054	ENSACLP00000040018	Ribonuclease P/MRP 14 subunit.	Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.	0.875
ENSACLP00000009054	hsdl2	ENSACLP00000009054	ENSACLP00000012921	Ribonuclease P/MRP 14 subunit.	Hydroxysteroid dehydrogenase like 2.	0.942
ENSACLP00000009054	pex5l	ENSACLP00000009054	ENSACLP00000029221	Ribonuclease P/MRP 14 subunit.	Peroxisomal biogenesis factor 5-like a.	0.819
ENSACLP00000009054	scp2	ENSACLP00000009054	ENSACLP00000018948	Ribonuclease P/MRP 14 subunit.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.992